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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891447.1_cds_XP_016446240.1_41116
CDS Infomation

[gene=LOC107771399] [db_xref=GeneID:107771399] [protein=tetratricopeptide repeat protein 5-like isoform X2] [protein_id=XP_016446240.1] [location=join(96077..96254,96355..96464,96791..96901,97007..97064,98375..98464,99082..99176,99374..99427,100952..101089,102316..102373,102470..102584,102711..102780,103800..103871,105214..105330)] [gbkey=CDS]
Sequence

ATGAGCATTTCGACCGGAAAAGTCGCCGGAGAGGATTTATTCGCCGAGGCAACTGCAGCT
GCCGATGAGCTTTACAGCTTTCGCGACAACTATTTCCCCTTAAGTCCGGAGGAGAGAGTC
TCCAAATTGCAAATCCAATCTGATCTCGCACTTCAAATCCTCGATACTATCCCTATAGAA
AAGAGGAAATTGCCACTTCAACGTGCAACTTATGAGTATTTAAGAGGCAAAGTACTTGAT
GTAGTTCCTGTATATAAGAAAGAAGCAGAGGATCATTTGTCCAAAGCAGTTAAGTTGAAT
CCGTCTCTTGTTGATGCTTGGCTGTGCCTAGGTAACTGCATTTGGAAGAAAGGAGATTTA
AATGCAGCAAAAAATTGCTTTACATTTGCCCTTAGCAAGGGTCTAAATAAGAATATTCTA
TGTCAACTATCAATGCTCGAAAGAAAACTGGCTCAAGATGCTGAAAATCCAGAAGAAGTT
GTTGATGAAAGTATTAAACATGCCAGGGAAGCGATCACTTTGGATGTCAAGGATGGATAT
TCTTGGTATAACCTAGGAAATGCATTTCTCACTTCTTTTTTTGTGACTGGAGCATGGGAT
CACAATAAGCTTATACAGTCATTAAAAGCATACCAGAATGCTGAAAGAGATGAAAAAATG
AAGTCAAACCCTGATCTGTATTACAACTGTGCCACTGTGAACAAATATCTGGAGAATTAC
GAGAGGGCCCTTACTGGATTTGAAGCTGCTGCATTAATGGATCCTGGTCTTAATGCTATG
GAGGATGCAAGAATGATGGTTCTGCTCCTTGATAAATTAGACTATTTGCTTCGGGGTCAG
AGTAAGGCTAAGCGGCTTTCTTCCCTATCATCATCACTTGCTACAGTTGATTTGAGCCCT
TCATACAAAAGAGCAACCATGGATCTCCTATCTGAAGGTCTTAATAAAGGATATGCAATC
ATTGGAAAAGTTCTGTTCTTCGCTAAGAATGAGAGTTTAGCTCCATTGTACTACGTGCTA
TCTGATTCAAATCACACGTTTTATGTAATTTCGGTGTATGGTATTCGCAGTGATGCTATT
AAAGAAGGAGATCAGGTCACCTTATTGGAGCCTTTCTACCGTTTTGTAGATTTTTCTTGG
AGAGAAAAGCTATACCAATTCAAATCAGTACGAGTGGATTTTGTGGAACAAGTTCTTGTA
AATGGAAAATGTTTGTCTCCTCATCATGCAGTTCGTACATCAATCTATGCGCAACTCAAG
GCATGA

Peptide Sequence

PEP ID

XP_016446240.1
PEP Infomation

PREDICTED: tetratricopeptide repeat protein 5-like isoform X2 [Nicotiana tabacum]
Sequence

MSISTGKVAGEDLFAEATAAADELYSFRDNYFPLSPEERVSKLQIQSDLALQILDTIPIE
KRKLPLQRATYEYLRGKVLDVVPVYKKEAEDHLSKAVKLNPSLVDAWLCLGNCIWKKGDL
NAAKNCFTFALSKGLNKNILCQLSMLERKLAQDAENPEEVVDESIKHAREAITLDVKDGY
SWYNLGNAFLTSFFVTGAWDHNKLIQSLKAYQNAERDEKMKSNPDLYYNCATVNKYLENY
ERALTGFEAAALMDPGLNAMEDARMMVLLLDKLDYLLRGQSKAKRLSSLSSSLATVDLSP
SYKRATMDLLSEGLNKGYAIIGKVLFFAKNESLAPLYYVLSDSNHTFYVISVYGIRSDAI
KEGDQVTLLEPFYRFVDFSWREKLYQFKSVRVDFVEQVLVNGKCLSPHHAVRTSIYAQLK
A

Transcript Sequence

Gene sequence data has not been registered.